2018-06-21 00:00:00 +0000

Haplogrep on GitHub

HaploGrep is for many researchers the tool of choice when it comes to haplogroup classification. We invested some time to put the command line version finally on GitHub and also added new blog posts to explain the formula behind.

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2018-06-15 00:00:00 +0000

Imputation Scripts

If you are interested in converting PLINK files to VCF files for imputation, I added some scripts to my GitHub repository here.

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2016-04-18 23:00:21 +0000

NAR WebServer Issue Publication - mtDNA-Server

Providing Hadoop as a Service is the main goal of Cloudgene, as described in one of my previous blog entries. Since Cloudgene is only the platform, useful use cases need to be implemented and integrated in Cloudgene. Here I want to introduce our newest service called mtDNA-Server, which have been published in the NAR WebServer Issue 2016.

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2016-04-17 22:00:21 +0000

NAR WebServer Issue Publication - HaploGrep2

In 2011 we published HaploGrep, a way to assign haplogroups to mtDNA profiles. It is now the defacto standard for haplogroup assignment with currently >2k users each month.

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